PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_42049
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family HB-other
Protein Properties Length: 75aa    MW: 8880.3 Da    PI: 9.6581
Description HB-other family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_42049genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox57.42.4e-182275352
                --SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHC....TS-HHHHHHHHHHHH CS
    Homeobox  3 kRttftkeqleeLeelFeknrypsaeereeLAkkl....gLterqVkvWFqNrR 52
                k  ++t+eq+e+Le+++ ++++ps  +r++L +++    +++ +q+kvWFqNrR
  PEQU_42049 22 KYVRYTPEQVEALERVYMECPKPSSLRRQQLIRECpilsNIEPKQIKVWFQNRR 75
                5679*************************************************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5007114.431775IPR001356Homeobox domain
SMARTSM003891.8E-51975IPR001356Homeobox domain
CDDcd000861.89E-122275No hitNo description
SuperFamilySSF466891.71E-152275IPR009057Homeodomain-like
PfamPF000467.0E-162375IPR001356Homeobox domain
Gene3DG3DSA:1.10.10.602.0E-172575IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 75 aa     Download sequence    Send to blast
MATMGKDGKS QQLELQQIDA GKYVRYTPEQ VEALERVYME CPKPSSLRRQ QLIRECPILS  60
NIEPKQIKVW FQNRR
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008665096.12e-35PREDICTED: homeobox-leucine zipper protein HOX32-like
RefseqXP_009397391.14e-35PREDICTED: homeobox-leucine zipper protein HOX32-like
SwissprotA2ZMN91e-35HOX33_ORYSI; Homeobox-leucine zipper protein HOX33
SwissprotQ2QM961e-35HOX33_ORYSJ; Homeobox-leucine zipper protein HOX33
TrEMBLI0IUI41e-36I0IUI4_9ASPA; Class III homeobox-leucine zipper protein
STRINGGRMZM2G023291_P017e-35(Zea mays)
STRINGGSMUA_Achr4P31660_0011e-34(Musa acuminata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP1849158
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G34710.17e-37HD-ZIP family protein